Gastric Adenocarcinoma (TMUCIH, PNAS 2015)

Summary

Gastric Adenocarcinoma (TMUCIH, PNAS 2015) is a study catalogued by cBioPortal DataHub under the cancer-type code egc. EvidenceHelix groups it with esophagus and stomach studies.

Study description

Whole-exome sequencing of 78 Gastric Adenocarcinomas and their matched normal samples.

Text as published in the source's study metadata.

Citation & PubMed

Chen et al. PNAS 2015

Linked PubMed records: PMID 25583476

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

egc_tmucih_2015

Short name

Stomach (TMUCIH 2015)

Source cancer-type code

egc

Reference genome

not given

Source access groups

PUBLIC

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Chen et al. PNAS 2015

• PubMed record 25583476 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Esophageal Cancer-TRAP Project (MSK, Lancet Oncol 2020)

  Targeted and WES recapture sequencing of tumor/normal samples from 37 Esophageal Cancer patients.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophageal Carcinoma (TCGA, Nature 2017)

  Whole exome sequencing of 559 esophageal and gastric carcinoma tumors with matched normals.

  Esophagus and stomachTCGA (other releases)Source code egcPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2022)

  Targeted sequencing of 237 esophagogastric tumor/normal pairs via MSK-IMPACT platform.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2023)

  Whole exome sequencing of 64 esophagogastric cancers and their matched normal samples.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Metastatic Esophagogastric Cancer (MSK, Cancer Discovery 2017)

  Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophageal Adenocarcinoma (DFCI, Nat Genet 2013)

  Whole-exome sequencing of 149 tumor/normal pairs and whole-genome sequencing of 16 pairs from 149 esophageal adenocarcinoma patients.

  Esophagus and stomachOther published and consortium studiesSource code escaPubMed 1

• Esophageal Squamous Cell Carcinoma (ICGC, Nature 2014)

  Whole-genome or whole-exome sequencing of 88 esophageal squamous cell carcinoma tumor/normal pairs.

  Esophagus and stomachOther published and consortium studiesSource code esccPubMed 1

• Esophageal Squamous Cell Carcinoma (UCLA, Nat Genet 2014)

  Whole exome sequencing (WXS) or targeted deep sequencing (TDS) of 139 paired esophageal squamous cell carcinoma patients.

  Esophagus and stomachOther published and consortium studiesSource code esccPubMed 1

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