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Pancreas16Breast32Prostate29Lung and pleura38Colorectal23Esophagus and stomach20Liver, bile duct and gallbladder29Kidney and bladder42Brain and nervous system38Blood, lymph and bone marrow38Skin and eye28Head and neck13Thyroid and endocrine8Gynecologic28Sarcoma and soft tissue22Germ cell and testis3Thymus3Multiple or not classified from the title48
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Library›Cancer study catalog›Liver, bile duct and gallbladder

Cancer family · grouped by EvidenceHelix from study titles

Liver, bile duct and gallbladder: 29 studies

Public cancer genomics studies in this group, with the collection each belongs to. Open a study for its description, citation and original source links.

  • Ampullary Carcinoma (Baylor College of Medicine, Cell Reports 2016)

    Exome sequencing analysis of 160 cancers arising in the periampullary region, 62 of these clearly arising from either the bile duct (n = 44) or the duodenum (n = 18) and 98 for which the epithelium of origin could not…

    Liver, bile duct and gallbladderOther published and consortium studiesSource code ampcaPubMed 1

  • Cholangiocarcinoma (ICGC, Cancer Discov 2017)

    Whole-exome sequencing and Targeted/Exome sequencing of 489 Cholangiocarcinoma samples from 10 countries.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code cholPubMed 1

  • Cholangiocarcinoma (MSK, Clin Cancer Res 2018)

    Targeted sequencing (MSK-IMPACT) of 195 tumor samples (194 with matched normals) from 192 cholangiocarcinoma patients.

    Liver, bile duct and gallbladderMSK studiesSource code cholPubMed 1

  • Cholangiocarcinoma (National Cancer Centre of Singapore, Nat Genet 2013)

    Whole exome sequencing of 15 cholangiocarcinoma cases.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code cholPubMed 1

  • Cholangiocarcinoma (National University of Singapore, Nat Genet 2012)

    Exome Sequencing for Opisthorchis viverrini-related cholangiocarcinoma in 8 O.viverrini-related tumors and matched normal tissue.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code cholPubMed 1

  • Cholangiocarcinoma (TCGA, Firehose Legacy)

    TCGA Cholangiocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/CHOL/20160128/). Previously known as TCGA Provisional.

    Liver, bile duct and gallbladderTCGA Firehose LegacySource code chol

  • Cholangiocarcinoma (TCGA, PanCancer Atlas)

    Cholangiocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/panca…

    Liver, bile duct and gallbladderTCGA PanCancer AtlasSource code cholPubMed 11

  • Combined Hepatocellular and Intrahepatic Cholangiocarcinoma (Peking University, Cancer Cell 2019)

    Whole-exome sequencing of 121 combined hepatocellular and intrahepatic cholangiocarcinoma (cHCC-ICC) patients with matched normal pairs (whole-genome sequenced samples are not included here).

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccihchPubMed 1

  • Gallbladder Cancer (MSK, 2022)

    Targeted sequencing of 244 Gallbladder cases via MSK-IMPACT where investigators calculated the Overall survival time for 100 metastatic gallbladder patients.

    Liver, bile duct and gallbladderMSK studiesSource code gbcPubMed 1

  • Gallbladder Cancer (MSK, Cancer 2018)

    Targeted Sequencing of 103 samples with matched normals from 101 Gallbladder cancer patients.

    Liver, bile duct and gallbladderMSK studiesSource code gbcPubMed 1

  • Gallbladder Carcinoma (Shanghai, Nat Genet 2014)

    Whole exome sequencing of 32 gallbladder carcinoma tumor/normal pairs.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code gbcPubMed 1

  • Hepatocellular Adenoma (INSERM, Cancer Cell 2014)

    Whole-exome sequencing of 46 liver tumor/normal pairs.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code liadPubMed 1

  • Hepatocellular Carcinoma (CLCA, Nature 2024)

    The Chinese Liver Cancer Atlas (CLCA) project. Deep whole-genome sequencing of 494 hepatocellular carcinomas and their matched normals. Data from CLC Atlas (http://lifeome.net:8080/clca/#/).

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccPubMed 1

  • Hepatocellular Carcinoma (MERiC/Basel, Nat Commun. 2022)

    Whole-exome sequencing of 122 Hepatocellular carcinomas and their matched normals. Dataset was generated in 2021 by MERiC and Charlotte Ng (hg19 original; Basel/Bern research pipeline).

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccPubMed 1

  • Hepatocellular Carcinoma (MSK, Clin Cancer Res 2018)

    MSK-IMPACT sequencing of 127 Hepatocellular Carcinoma tumor samples with matched normals.

    Liver, bile duct and gallbladderMSK studiesSource code hccPubMed 1

  • Hepatocellular Carcinoma (MSK, Clin Cancer Res 2024)

    Targeted sequencing of 1,370 hepatobiliary cancer samples (with 1366 matched normals) via MSK-IMPACT. This data is available under the Creative Commons BY-NC-ND 4.0 license (https://creativecommons.org/licenses/by-nc-…

    Liver, bile duct and gallbladderMSK studiesSource code hccPubMed 1

  • Hepatocellular Carcinoma (MSK, JCO Precis Oncol 2023)

    Targeted sequencing of 51 hepatocellular carcinoma patients and their matched normal samples via MSK-IMPACT.

    Liver, bile duct and gallbladderMSK studiesSource code hccPubMed 1

  • Hepatocellular Carcinomas (INSERM, Nat Genet 2015)

    Whole-exome sequencing of 243 liver tumors and matched normals.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccPubMed 1

  • Intrahepatic Cholangiocarcinoma (JHU, Nat Genet 2013)

    Exome sequencing of tumor/normal pairs from 32 intrahepatic cholangiocarcinoma cases and 8 gall bladder carcinoma cases.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code cholPubMed 1

  • Intrahepatic Cholangiocarcinoma (Mount Sinai 2015)

    Whole-exome sequencing of 8 tumor-normal paired iCCA samples by Liver Cancer Program at the Icahn School of Medicine at Mount Sinai, in collaboration with Barcelona-Clínic Liver Cancer Group.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code ihchPubMed 1

  • Intrahepatic Cholangiocarcinoma (MSK, Clin Cancer Res 2021)

    Targeted sequencing of IMPACT and CMO samples

    Liver, bile duct and gallbladderMSK studiesSource code ihchPubMed 1

  • Intrahepatic Cholangiocarcinoma (MSK, Hepatology 2021)

    Targeted sequencing of 412 intrahepatic cholangiocarcinoma tumor/normal sample pairs.

    Liver, bile duct and gallbladderMSK studiesSource code ihchPubMed 1

  • Intrahepatic Cholangiocarcinoma (Shanghai, Nat Commun 2014)

    Whole exome sequencing of 103 tumor/normal sample pairs in 103 intrahepatic cholangiocarcinoma patients.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code ihchPubMed 1

  • Liver Hepatocellular Adenoma and Carcinomas (MSK, PLOS One 2018)

    Targeted sequencing of tumor/normal pairs of 9 LIAD and 10 HCC patients via MSK-IMPACT platform.

    Liver, bile duct and gallbladderMSK studiesSource code hccPubMed 1

  • Liver Hepatocellular Carcinoma (AMC, Hepatology 2014)

    Whole exome sequencing of 231 hepatocellular carcinomas and matched normal tissue pairs.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccPubMed 1

  • Liver Hepatocellular Carcinoma (RIKEN, Nat Genet 2012)

    Whole-genome sequencing of 27 hepatocellular carcinoma tumor/norma pairs from RIKEN.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code hccPubMed 1

  • Liver Hepatocellular Carcinoma (TCGA, Firehose Legacy)

    TCGA Liver Hepatocellular Carcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/LIHC/20160128/). Previously known as TCGA Provisional.

    Liver, bile duct and gallbladderTCGA Firehose LegacySource code hcc

  • Liver Hepatocellular Carcinoma (TCGA, PanCancer Atlas)

    Liver Hepatocellular Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancance…

    Liver, bile duct and gallbladderTCGA PanCancer AtlasSource code hccPubMed 12

  • Metastatic Biliary Tract Cancers (SUMMIT - Neratinib Basket Trial, 2022)

    Targeted sequencing of 25 advanced biliary tract cancers and their matched normals.

    Liver, bile duct and gallbladderOther published and consortium studiesSource code biliary_tract

Other families

  • Pancreas16 studies
  • Breast32 studies
  • Prostate29 studies
  • Lung and pleura38 studies
  • Colorectal23 studies
  • Esophagus and stomach20 studies
  • Kidney and bladder42 studies
  • Brain and nervous system38 studies
  • Blood, lymph and bone marrow38 studies
  • Skin and eye28 studies
  • Head and neck13 studies
  • Thyroid and endocrine8 studies
  • Gynecologic28 studies
  • Sarcoma and soft tissue22 studies
  • Germ cell and testis3 studies
  • Thymus3 studies
  • Multiple or not classified from the title48 studies

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence