Testicular Germ Cell Cancer (TCGA, Firehose Legacy)

Summary

Testicular Germ Cell Cancer (TCGA, Firehose Legacy) is a study catalogued by cBioPortal DataHub under the cancer-type code nsgct. EvidenceHelix groups it with germ cell and testis studies and lists it in the TCGA Firehose Legacy collection.

Study description

TCGA Testicular Germ Cell Cancer. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/TGCT/20160128/). Previously known as TCGA Provisional.

Text as published in the source's study metadata.

Citation & PubMed

The source lists no citation or PubMed id for this study.

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

tgct_tcga

Short name

Testicular germ cell (TCGA)

Source cancer-type code

nsgct

Reference genome

not given

Source access groups

PUBLIC

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

The source lists no citation or PubMed id for this study.

Related studies

• Germ Cell Tumors (MSK, J Clin Oncol 2016)

  Whole-exome and Targeted sequencing of 19 samples and Targeted sequencing of 161 samples from 180 Germ Cell Tumor patients.

  Germ cell and testisMSK studiesSource code gctPubMed 1

• Testicular Germ Cell Tumors (TCGA, PanCancer Atlas)

  Testicular Germ Cell Tumors TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancancerat…

  Germ cell and testisTCGA PanCancer AtlasSource code testisPubMed 11

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