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Ovarian Serous Cystadenocarcinoma (TCGA, Nature 2011)

cBioPortal DataHub · study ov_tcga_pub · www.cbioportal.org/study/summary?id=ov_tcga_pub

Study metadataOpen database (ODbL)PubMed 1TCGA (other releases)Approximately 1 min read

Table of Contents

1. Summary2. Study description3. Citation & PubMed4. Source & licence

Summary

Ovarian Serous Cystadenocarcinoma (TCGA, Nature 2011) is a study catalogued by cBioPortal DataHub under the cancer-type code hgsoc. EvidenceHelix groups it with gynecologic studies and lists it in the TCGA (other releases) collection.

This page is catalog metadata only: what the study is called and where to find it. It does not report findings, mutation frequencies or patient numbers, and it is not clinical guidance.

What this page is

Study description

Whole exome sequencing of 489 high-grade serous ovarian adenocarcinoma tumor/normal pairs. The Cancer Genome Atlas (TCGA) (http://cancergenome.nih.gov/) Serous Ovarian Cancer project. 489 cases. Raw data via the TCGA Data Portal (https://tcga-data.nci.nih.gov/docs/publications/ov_2011/).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Nature 2011

Linked PubMed records: PMID 21720365

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier
ov_tcga_pub
Short name
Ovarian (TCGA pub)
Source cancer-type code
hgsoc
Reference genome
not given
Source access groups
PUBLIC
Original study
View on cBioPortal
Metadata file
meta_study.txt at e1b75cd25b
Database licence
ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Nature 2011

  • PubMed record 21720365 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

  • High-Grade Serous Ovarian Cancer (MSK, NPJ Genome Med 2021)

    Targeted Sequencing of 45 Serous Ovarian Cancer tumor/normal pairs from 45 patients.

    GynecologicMSK studiesSource code hgsocPubMed 1
  • Ovarian Cancer - MSK SPECTRUM (MSK, Nature 2022)

    Multi-region, multi-modal profiling of 42 untreated high-grade serous ovarian cancer (HGSOC) tumor/normal pairs. This study reports an integrative analysis of mutational processes and their impact on the tumor microen…

    GynecologicMSK studiesSource code hgsocPubMed 1
  • Ovarian Serous Cystadenocarcinoma (TCGA, Firehose Legacy)

    TCGA Ovarian Serous Cystadenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/OV/20160128/). Previously known as TCGA Provisional.

    GynecologicTCGA Firehose LegacySource code hgsoc
  • Ovarian Serous Cystadenocarcinoma (TCGA, PanCancer Atlas)

    Ovarian Serous Cystadenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/panca…

    GynecologicTCGA PanCancer AtlasSource code hgsocPubMed 12
  • Uterine Corpus Endometrial Carcinoma (TCGA, Nature 2013)

    Whole exome sequencing of 373 endometrial carcinoma tumors with matched normals. TCGA Uterine Corpus Endometrial Carcinoma project; raw data at the NCI (https://tcga-data.nci.nih.gov/docs/publications/ucec_2013/).

    GynecologicTCGA (other releases)Source code ucecPubMed 1
  • Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012)

    Targeted sequencing of 1020 samples from Cancer Cell Line Encyclopedia from the Broad Institute and Novartis.

    GynecologicOther published and consortium studiesSource code mixedPubMed 1
  • Cervical Cancer (MSK, Clin Cancer Res 2023)

    Targeted sequencing of 177 cervical tumors and their matched normal samples via MSK-IMPACT.

    GynecologicMSK studiesSource code cervixPubMed 1
  • Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas)

    Cervical Squamous Cell Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancan…

    GynecologicTCGA PanCancer AtlasSource code cescPubMed 12

Your notes

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At a glance

Study ID
ov_tcga_pub
Cancer family
Gynecologic
Collection
TCGA (other releases)
Source code
hgsoc
PubMed links
1

Family and collection are EvidenceHelix groupings derived from the title; the source code is the source's own.

Related studies See all →

  • High-Grade Serous Ovarian Cancer (MSK, NPJ Genome Med 2021)MSK studies
  • Ovarian Cancer - MSK SPECTRUM (MSK, Nature 2022)MSK studies
  • Ovarian Serous Cystadenocarcinoma (TCGA, Firehose Legacy)TCGA Firehose Legacy
  • Ovarian Serous Cystadenocarcinoma (TCGA, PanCancer Atlas)TCGA PanCancer Atlas

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Original sources

  • Study on cBioPortal ↗
  • Source metadata file ↗
  • PubMed 21720365 ↗

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence