Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas)

Summary

Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas) is a study catalogued by cBioPortal DataHub under the cancer-type code cesc. EvidenceHelix groups it with gynecologic studies and lists it in the TCGA PanCancer Atlas collection.

Study description

Cervical Squamous Cell Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Cell 2018

Linked PubMed records: PMID 29625048, PMID 29596782, PMID 29622463, PMID 29617662, PMID 29625055, PMID 29625050, PMID 29617662, PMID 30643250, PMID 32214244, PMID 29625049, PMID 29850653, PMID 36334560

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

cesc_tcga_pan_can_atlas_2018

Short name

Cervical (TCGA PanCan)

Source cancer-type code

cesc

Reference genome

not given

Source access groups

PUBLIC;PANCAN

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Cell 2018

• PubMed record 29625048 ↗
• PubMed record 29596782 ↗
• PubMed record 29622463 ↗
• PubMed record 29617662 ↗
• PubMed record 29625055 ↗
• PubMed record 29625050 ↗
• PubMed record 29617662 ↗
• PubMed record 30643250 ↗
• PubMed record 32214244 ↗
• PubMed record 29625049 ↗
• PubMed record 29850653 ↗
• PubMed record 36334560 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA, Firehose Legacy)

  TCGA Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/CESC/20160128/). Previously known as TCGA Provisional.

  GynecologicTCGA Firehose LegacySource code cesc

• Ovarian Serous Cystadenocarcinoma (TCGA, PanCancer Atlas)

  Ovarian Serous Cystadenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/panca…

  GynecologicTCGA PanCancer AtlasSource code hgsocPubMed 12

• Uterine Carcinosarcoma (TCGA, PanCancer Atlas)

  Uterine Carcinosarcoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/p…

  GynecologicTCGA PanCancer AtlasSource code ucsPubMed 11

• Uterine Corpus Endometrial Carcinoma (TCGA, PanCancer Atlas)

  Uterine Corpus Endometrial Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pa…

  GynecologicTCGA PanCancer AtlasSource code ucecPubMed 12

• Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012)

  Targeted sequencing of 1020 samples from Cancer Cell Line Encyclopedia from the Broad Institute and Novartis.

  GynecologicOther published and consortium studiesSource code mixedPubMed 1

• Cervical Cancer (MSK, Clin Cancer Res 2023)

  Targeted sequencing of 177 cervical tumors and their matched normal samples via MSK-IMPACT.

  GynecologicMSK studiesSource code cervixPubMed 1

• Endometrial and Ovarian Cancer (MSK, Nature Medicine 2024)

  Targeted sequencing of 33 endometrial and ovarian tumors and their matched normals via MSK-IMPACT.

  GynecologicMSK studiesSource code mixedPubMed 1

• Endometrial Cancer (MSK, 2018)

  MSK-IMPACT sequencing of 197 advanced-staged endometrial cancer tumor samples with matched normals, from 189 patients treated at MSK.

  GynecologicMSK studiesSource code ucecPubMed 1

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