Research reading room
Colorectal Adenocarcinoma (DFCI, Cell Reports 2016)
Summary
Colorectal Adenocarcinoma (DFCI, Cell Reports 2016) is a study catalogued by cBioPortal DataHub under the cancer-type code coadread. EvidenceHelix groups it with colorectal studies.
Study description
Whole-exome sequencing of 619 colorectal cancers with clinicopathologic annotations.
Text as published in the source's study metadata.
Citation & PubMed
Giannakis et al. Cell Reports 2016
Linked PubMed records: PMID 27149842
Source & licence
Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.
Source metadata
- Study identifier
- coadread_dfci_2016
- Short name
- Colorectal (DFCI 2016)
- Source cancer-type code
- coadread
- Reference genome
- not given
- Source access groups
- PUBLIC
- Original study
- View on cBioPortal
- Metadata file
- meta_study.txt at e1b75cd25b
- Database licence
- ODC Open Database License (ODbL) 1.0
Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.
Citations
Giannakis et al. Cell Reports 2016
Citation counts are not part of the source metadata and are not shown.
Related studies
-
Colorectal Adenocarcinoma (Genentech, Nature 2012)
Whole-genome sequencing of 74 paired colon tumor-normal samples.
ColorectalOther published and consortium studiesSource code coadreadPubMed 1 -
Colorectal Cancer (CAS Shanghai, Cancer Cell 2020)
Whole-exome sequencing of 146 colorectal tumor/normal pairs from a chinese cohort, covering 70 metastatic and 76 non-metastatic colorectal cancer patients.
ColorectalOther published and consortium studiesSource code coadreadPubMed 1 -
Colorectal Cancer- ChangKang Project (SYSUCC, Nat Commun 2022)
Whole exome sequencing on 1,015 Chinese colorectal cancer patients, analyzing both tumor and matched normal tissues using the HapOnco WESplus capture-based next-generation sequencing (NGS) platform as part of the Chan…
ColorectalOther published and consortium studiesSource code coadreadPubMed 1 -
Pre-cancer Colorectal Polyps (HTAN Vanderbilt, Cell 2021)
Whole-exome sequencing and single-cell transcriptomics analysis of 61 pre-malignant colorectal polyps (discovery and validation sets) and their matched normal colon tissues.
ColorectalOther published and consortium studiesSource code coadreadPubMed 1 -
Colorectal Adenocarcinoma (TCGA, Firehose Legacy)
TCGA Colorectal Adenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/COADREAD/20160128/). Previously known as TCGA Provisional.
ColorectalTCGA Firehose LegacySource code coadread -
Colorectal Adenocarcinoma (TCGA, Nature 2012)
Whole exome sequencing in 224 of the 276 colorectal carcinoma tumor/normal pairs. The Cancer Genome Atlas (TCGA) Colorectal Cancer project.
ColorectalTCGA (other releases)Source code coadreadPubMed 1 -
Colorectal Adenocarcinoma (TCGA, PanCancer Atlas)
Colorectal Adenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratla…
ColorectalTCGA PanCancer AtlasSource code coadreadPubMed 12 -
Colorectal Adenocarcinoma Triplets (MSK, Genome Biol 2014)
Targeted sequencing of primary, metastatic, and normal tissues from 69 colorectal adenocarcinoma patients.
ColorectalMSK studiesSource code coadreadPubMed 1