Skip to content
EvidenceHelixEvidenceLib · Scientific Encyclopedia
⌘ K

Scientific library

EvidenceLib encyclopediaAll articles A–Z2,100Open textbooks0Cancer study catalog458How it is made

My workspace this browser

Saved pages0Notes & annotations0

Recently viewed

Explore by cancer family

Pancreas16Breast32Prostate29Lung and pleura38Colorectal23Esophagus and stomach20Liver, bile duct and gallbladder29Kidney and bladder42Brain and nervous system38Blood, lymph and bone marrow38Skin and eye28Head and neck13Thyroid and endocrine8Gynecologic28Sarcoma and soft tissue22Germ cell and testis3Thymus3Multiple or not classified from the title48
Plans & pricingCompare EvidenceHelix workspace plans
Library›EvidenceLib›Reader
Explore more with EvidenceHelix Workspace

Compare studies, analyze evidence and create research reports with premium tools.

Explore Researcher plans

Research reading room

Small Cell Lung Cancer (Johns Hopkins, Nat Genet 2012)

cBioPortal DataHub · study sclc_jhu · www.cbioportal.org/study/summary?id=sclc_jhu

Study metadataOpen database (ODbL)PubMed 1Other published and consortium studiesApproximately 1 min read

Table of Contents

1. Summary2. Study description3. Citation & PubMed4. Source & licence

Summary

Small Cell Lung Cancer (Johns Hopkins, Nat Genet 2012) is a study catalogued by cBioPortal DataHub under the cancer-type code sclc. EvidenceHelix groups it with lung and pleura studies.

This page is catalog metadata only: what the study is called and where to find it. It does not report findings, mutation frequencies or patient numbers, and it is not clinical guidance.

What this page is

Study description

Whole exome-sequencing of 80 human SCLCs, including 36 primary SCLC human tumor and adjacent normal sample pairs and 17 paired SCLC cell lines and their patient-matched lymphoblastoid lines, as well as 4 primary SCLC tumors and 23 SCLC cell lines without matched normal controls. Data from Rudin et al., Nat Gene 2012. Sequencing data are publicly available in EGA (EGAS0000100334)

Text as published in the source's study metadata.

Citation & PubMed

Rudin et al. Nat Genet 2012

Linked PubMed records: PMID 22941189

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier
sclc_jhu
Short name
Small Cell Lung (JHU)
Source cancer-type code
sclc
Reference genome
not given
Source access groups
PUBLIC;SCLCPORTAL
Original study
View on cBioPortal
Metadata file
meta_study.txt at e1b75cd25b
Database licence
ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Rudin et al. Nat Genet 2012

  • PubMed record 22941189 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

  • Small Cell Lung Cancer (CLCGP, Nat Genet 2012)

    Comprehensive whole exam profiling of 29 small cell lung cancer samples. Generated by the Clinical Lung Cancer Genome Project. Data from Peifer et al., Nat Genet 2012 (German group). Paper states data available at htt…

    Lung and pleuraOther published and consortium studiesSource code sclcPubMed 1
  • Small Cell Lung Cancer (U Cologne, Nature 2015)

    Whole-genome sequencing of 120 small cell lung cancer(SCLC) tumour samples and matched normal material. Data from George et al., Nature 2015 (German group). Paper states data available in GEO (GSE69091).

    Lung and pleuraOther published and consortium studiesSource code sclcPubMed 1
  • Small-Cell Lung Cancer (Multi-Institute, Cancer Cell 2017)

    Whole Exome Sequencing of 10 paired chemosensitive and chemoresistant SCLC PDX. Data from Gardner et al., Cancer Cell 2017. Data available in dbGaP (PHS001249.v1.p1).

    Lung and pleuraOther published and consortium studiesSource code sclcPubMed 1
  • Lung Adenocarcinoma (Broad, Cell 2012)

    Whole-exome and/or whole-genome sequencing of 183 lung adenocarcinomas and matched normal tissue pairs.

    Lung and pleuraOther published and consortium studiesSource code luadPubMed 1
  • Lung Adenocarcinoma (CAS, Cell 2020)

    Whole-exome sequencing of 103 lung adenocarcinoma cases and their matched normals in Chinese patients.

    Lung and pleuraOther published and consortium studiesSource code luadPubMed 1
  • Lung Adenocarcinoma (CPTAC, Cell 2020)

    Whole genome (WGS) or whole exome sequencing (WES) of 110 tumors and 101 matched normal adjacent tissues in lung adenocarcinoma. Proteogenomic characterization generated by CPTAC.

    Lung and pleuraOther published and consortium studiesSource code luadPubMed 1
  • Lung Adenocarcinoma (OncoSG, Nat Genet 2020)

    Whole-exome and transcriptome sequencing of 305 east asian lung adenocarcinomas with matched normals. Courtesy of OncoSG (https://src.gisapps.org/OncoSG/). Lung Cancer Consortium Singapore (LCCS).

    Lung and pleuraOther published and consortium studiesSource code luadPubMed 1
  • Lung Adenocarcinoma (TSP, Nature 2008)

    Targeted sequencing of 163 lung adenocarcinoma tumor/normal pairs. Generated by WashU/Broad.

    Lung and pleuraOther published and consortium studiesSource code luadPubMed 1

Your notes

Notes and highlights stay in this browser only; they are not sent to EvidenceHelix.

At a glance

Study ID
sclc_jhu
Cancer family
Lung and pleura
Collection
Other published and consortium studies
Source code
sclc
PubMed links
1

Family and collection are EvidenceHelix groupings derived from the title; the source code is the source's own.

Related studies See all →

  • Small Cell Lung Cancer (CLCGP, Nat Genet 2012)Other published and consortium studies
  • Small Cell Lung Cancer (U Cologne, Nature 2015)Other published and consortium studies
  • Small-Cell Lung Cancer (Multi-Institute, Cancer Cell 2017)Other published and consortium studies
  • Lung Adenocarcinoma (Broad, Cell 2012)Other published and consortium studies

My notes & annotations (0)

Nothing yet. Select text and press Highlight, or write a note in the Notes tab. Stored in this browser only.

Original sources

  • Study on cBioPortal ↗
  • Source metadata file ↗
  • PubMed 22941189 ↗

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence