Normal Keratinocytes (UCSF, BioRxiv 2024)

Summary

Normal Keratinocytes (UCSF, BioRxiv 2024) is a study catalogued by cBioPortal DataHub under the cancer-type code skin. EvidenceHelix groups it with multiple or not classified from the title studies.

Study description

Whole exome and targeted sequencing data of 137 normal keratinocytes samples from human skin. The study is part of a broader analysis involving three distinct cell types, with findings stratified accordingly (see related melanocytes (https://www.cbioportal.org/study/summary?id=skin_melanocytes_2024) and fibroblasts (https://www.cbioportal.org/study/summary?id=normal_skin_fibroblast_2024) studies).

Text as published in the source's study metadata.

Citation & PubMed

Tandukar et al. BioRxiv 2024

Linked PubMed records: PMID 39091884

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

normal_skin_keratinocytes_2024

Short name

not given

Source cancer-type code

skin

Reference genome

not given

Source access groups

not given

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Tandukar et al. BioRxiv 2024

• PubMed record 39091884 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Normal Fibroblasts (UCSF, BioRxiv 2024)

  Whole exome and targeted sequencing data of 23 normal fibroblast samples from human skin. The study is part of a broader analysis involving three distinct cell types, with findings stratified accordingly (see related…

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• Normal Melanocytes (UCSF, Nature 2020)

  Whole exome sequencing and targeted sequencing data of 308 normal melanocytes samples from human skin. In addition to data retrieved from four different articles, the study is part of a broader analysis involving thre…

  Multiple or not classified from the titleOther published and consortium studiesSource code skinPubMed 4

• Cancer Cell Line Encyclopedia (Broad, 2019)

  Cancer Cell Line Encyclopedia from the Broad Institute and Novartis, updated 2019. Data downloaded from the Broad CCLE Portal (https://portals.broadinstitute.org/ccle/data). For more info about the proteomics data, se…

  Multiple or not classified from the titleOther published and consortium studiesSource code mixedPubMed 2

• Cancer Cell Line Encyclopedia (Broad, Nat Rev Cancer 2025)

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• Cancer Cell Line Encyclopedia (Genentech, Nat biotech 2014)

  Single-nucleotide polymorphism (SNP) array analysis and RNA sequencing and of 675 mixed human cancer cell lines from the Cancer Cell Line Encyclopedia.

  Multiple or not classified from the titleOther published and consortium studiesSource code mixedPubMed 1

• China Pan-cancer (OrigiMed, Nature 2022)

  Landscape of genomic alterations in 10,194 solid tumors from the Chinese population

  Multiple or not classified from the titleOther published and consortium studiesSource code mixedPubMed 1

• Insulinoma (Shanghai, Nat Commun 2013)

  Whole exome sequencing of 10 benign insulinoma tumor/normal pairs.

  Multiple or not classified from the titleOther published and consortium studiesSource code panetPubMed 1

• Metastatic Solid Cancers (UMich, Nature 2017)

  Whole-exome and -transcriptome sequencing of 500 adult patients with metastatic solid tumor/primary normal pairs of diverse lineage and biopsy site.

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