Neuroblastoma (Broad, Nat Genet 2013)

Summary

Neuroblastoma (Broad, Nat Genet 2013) is a study catalogued by cBioPortal DataHub under the cancer-type code nbl. EvidenceHelix groups it with brain and nervous system studies.

Study description

Whole Genome and Whole Exome sequencing of 240 high-risk neuroblastoma tumor/normal pairs.

Text as published in the source's study metadata.

Citation & PubMed

Pugh et al. Nat Genet 2013

Linked PubMed records: PMID 23334666

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

nbl_broad_2013

Short name

NBL (Broad)

Source cancer-type code

nbl

Reference genome

not given

Source access groups

not given

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Pugh et al. Nat Genet 2013

• PubMed record 23334666 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Neuroblastoma (AMC Amsterdam, Nature 2012)

  Whole genome sequencing of 87 primary neuroblastoma tumors and their matched normals.

  Brain and nervous systemOther published and consortium studiesSource code nblPubMed 1

• Neuroblastoma (Broad, Nature 2015)

  Whole-genome sequencing of 56 neuroblastoma tumor/normal pairs.

  Brain and nervous systemOther published and consortium studiesSource code nblPubMed 1

• Pediatric Neuroblastoma (TARGET, 2018)

  Whole genome or whole exome sequencing on 1089 NBL samples. Comprehensive profiling of 1089 NBL samples. TARGET data is intended exclusively for biomedical research using pediatric data (i.e., the research objectives…

  Brain and nervous systemNCI TARGETSource code nbl

• Brain Tumor PDXs (Mayo Clinic, Clin Cancer Res 2020)

  WES on a total of 106 PDXs and 80 PDXs have the matched germline (blood) samples sequenced. A total of 66 PDXs have RNASeq available

  Brain and nervous systemOther published and consortium studiesSource code difgPubMed 1

• Cutaneous Neurofibroma Data Resource (CTF, Scientific Data 2021)

  The data are contributed by researchers funded by the Children's Tumor Foundation. The reprocessing of the raw data is managed by the NF Open Science Initiative NF Open Science Initiative .

  Brain and nervous systemOther published and consortium studiesSource code nfibPubMed 2

• Diffuse Glioma (GLASS Consortium, Nature 2019)

  Whole genome or whole exome sequencing analysis of temporally separated diffuse glioma tumor/normal pairs from 222 adult patients.

  Brain and nervous systemOther published and consortium studiesSource code difgPubMed 1

• Diffuse Glioma (GLASS Consortium)

  Whole genome or whole exome sequencing analysis of temporally separated diffuse glioma tumor/normal pairs from 329 adult patients. The data provided is based on the May 31, 2022 version and can be accessed at Synapse…

  Brain and nervous systemOther published and consortium studiesSource code difgPubMed 2

• Glioblastoma (Columbia, Nat Med. 2019)

  Whole-exome sequencing of 32 out of 42 glioblastomas patients with matched normals.

  Brain and nervous systemOther published and consortium studiesSource code difgPubMed 1

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