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Acute Myeloid Leukemia (TCGA, PanCancer Atlas)

cBioPortal DataHub · study laml_tcga_pan_can_atlas_2018 · www.cbioportal.org/study/summary?id=laml_tcga_pan_can_atlas_2018

Study metadataOpen database (ODbL)PubMed 11TCGA PanCancer AtlasApproximately 1 min read

Table of Contents

1. Summary2. Study description3. Citation & PubMed4. Source & licence

Summary

Acute Myeloid Leukemia (TCGA, PanCancer Atlas) is a study catalogued by cBioPortal DataHub under the cancer-type code aml. EvidenceHelix groups it with blood, lymph and bone marrow studies and lists it in the TCGA PanCancer Atlas collection.

This page is catalog metadata only: what the study is called and where to find it. It does not report findings, mutation frequencies or patient numbers, and it is not clinical guidance.

What this page is

Study description

Acute Myeloid Leukemia TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Cell 2018

Linked PubMed records: PMID 29625048, PMID 29596782, PMID 29622463, PMID 29617662, PMID 29625055, PMID 29625050, PMID 29617662, PMID 32214244, PMID 29625049, PMID 29850653, PMID 36334560

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier
laml_tcga_pan_can_atlas_2018
Short name
AML (TCGA PanCan)
Source cancer-type code
aml
Reference genome
not given
Source access groups
PUBLIC;PANCAN
Original study
View on cBioPortal
Metadata file
meta_study.txt at e1b75cd25b
Database licence
ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Cell 2018

  • PubMed record 29625048 ↗
  • PubMed record 29596782 ↗
  • PubMed record 29622463 ↗
  • PubMed record 29617662 ↗
  • PubMed record 29625055 ↗
  • PubMed record 29625050 ↗
  • PubMed record 29617662 ↗
  • PubMed record 32214244 ↗
  • PubMed record 29625049 ↗
  • PubMed record 29850653 ↗
  • PubMed record 36334560 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

  • Acute Myeloid Leukemia (OHSU, Cancer Cell 2022)

    Whole-exome and transcriptomic sequencing of 942 acute myeloid leukemia samples (with 500 matched normals) from the Beat AML program.

    Blood, lymph and bone marrowOther published and consortium studiesSource code amlPubMed 1
  • Acute Myeloid Leukemia (OHSU, Nature 2018)

    Whole-exome sequencing of 672 acute myeloid leukemia samples (with 454 matched normals) from the Beat AML program.

    Blood, lymph and bone marrowOther published and consortium studiesSource code amlPubMed 1
  • Acute Myeloid Leukemia (TCGA, Firehose Legacy)

    TCGA Acute Myeloid Leukemia. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/LAML/20160128/). Previously known as TCGA Provisional.

    Blood, lymph and bone marrowTCGA Firehose LegacySource code aml
  • Acute Myeloid Leukemia (TCGA, NEJM 2013)

    Whole-genome or whole-exome sequencing analysis of 200 adult de novo AML tumor/normal pairs. TCGA Acute Myeloid Leukemia Project; raw data at the NCI (https://tcga-data.nci.nih.gov/tcga/tcgaCancerDetails.jsp?diseaseTy…

    Blood, lymph and bone marrowTCGA (other releases)Source code amlPubMed 1
  • Pediatric Acute Myeloid Leukemia (St. Jude, Nat Genet 2024)

    Molecular profiling of 887 pediatric acute myeloid leukemia cases and their matched normals using RNA-Seq, WES and WGS.

    Blood, lymph and bone marrowOther published and consortium studiesSource code amlPubMed 1
  • Pediatric Acute Myeloid Leukemia (TARGET, 2018)

    Whole genome or whole exome sequencing on 333 TARGET-AML samples. Comprehensive profiling of TARGET-AML samples. TARGET data is intended exclusively for biomedical research using pediatric data (i.e., the research obj…

    Blood, lymph and bone marrowNCI TARGETSource code aml
  • Diffuse Large B-Cell Lymphoma (TCGA, PanCancer Atlas)

    Diffuse Large B-Cell Lymphoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancancer…

    Blood, lymph and bone marrowTCGA PanCancer AtlasSource code dlbclnosPubMed 11
  • Acute Lymphoblastic Leukemia (St Jude, Nat Genet 2015)

    Comprehensive profiling of infant MLL-rearranged acute lymphoblastic leukemia (MLL-R ALL)

    Blood, lymph and bone marrowOther published and consortium studiesSource code bllPubMed 1

Your notes

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At a glance

Study ID
laml_tcga_pan_can_atlas_2018
Cancer family
Blood, lymph and bone marrow
Collection
TCGA PanCancer Atlas
Source code
aml
PubMed links
11

Family and collection are EvidenceHelix groupings derived from the title; the source code is the source's own.

Related studies See all →

  • Acute Myeloid Leukemia (OHSU, Cancer Cell 2022)Other published and consortium studies
  • Acute Myeloid Leukemia (OHSU, Nature 2018)Other published and consortium studies
  • Acute Myeloid Leukemia (TCGA, Firehose Legacy)TCGA Firehose Legacy
  • Acute Myeloid Leukemia (TCGA, NEJM 2013)TCGA (other releases)

My notes & annotations (0)

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Original sources

  • Study on cBioPortal ↗
  • Source metadata file ↗
  • PubMed 29625048 ↗
  • PubMed 29596782 ↗
  • PubMed 29622463 ↗

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence