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Choline Deficiency

Metabolism and Endocrine Disease · NLM MeSH · updated 2026-11-04 · version 1

Citations verified against PubMedNot yet clinician-reviewed10 referencesApproximately 5 min read

A condition produced by a deficiency of choline in animals.

Table of Contents

1. Definition2. Research landscape3. Reading the evidence4. Open-access studies5. Key reviews6. References7. About this article

Definition and research guide

This page combines a MeSH definition, publication statistics and selected research abstracts. It is a starting point for reading the literature, not a medical textbook or a systematic evidence review.

Content available: 4 complete abstracts (871 words), 10 references. Full article text is not stored or reproduced here; follow the PMID, DOI or PMC links to read the original sources and their access terms.

Definition

A condition produced by a deficiency of choline in animals. Choline is known as a lipotropic agent because it has been shown to promote the transport of excess fat from the liver under certain conditions in laboratory animals. Combined deficiency of choline (included in the B vitamin complex) and all other methyl group donors causes liver cirrhosis in some animals. Unlike compounds normally considered as vitamins, choline does not serve as a cofactor in enzymatic reactions. (From Saunders Dictionary and Encyclopedia of Laboratory Medicine and Technology, 1984)

Definition: NLM Medical Subject Headings (MeSH) scope note (Public domain (U.S. National Library of Medicine); attribution requested). View the MeSH record.

Also known as: Deficiency, Choline; Choline Deficiencies; Deficiencies, Choline.

Where it fits in the MeSH classification

Broader topics
Vitamin B Deficiency

Related concepts

  • Choline

Research landscape

PubMed indexes 1,718 records tagged with the MeSH heading “Choline Deficiency” (counts retrieved 2026-10-31). 179 of them (10.4%) were published from 2020 onward, and the busiest period so far is through 1999 with 905 records.

Reviews account for 106 records (6.2%) and meta-analyses for 0. Randomized controlled trials number 14 (0.8%) as a share of all records on the topic. Randomized trials make up only a small share of this literature, so much of what is known comes from laboratory, observational or descriptive work.

PubMed records by publication periodthrough 1999: 905 records; 2000-2009: 254 records; 2010-2019: 380 records; 2020 onward: 179 records905through 19992542000-20093802010-20191792020 onward
Records in PubMed indexed with this heading, by publication period. Real counts from NCBI E-utilities; the final period covers only part of the current year. Volume reflects how much has been published, not how strong the evidence is.
Show the data
PeriodRecords
through 1999905
2000-2009254
2010-2019380
2020 onward179
Share of records by publication typeReviews: 6.2 percent; Meta-analyses: 0.0 percent; Randomized controlled trials: 0.8 percentReviews6.2% (106)Meta-analyses0.0% (0)Randomized controlled trials0.8% (14)
Share of all PubMed records on this heading that carry each publication type. Types overlap with other records, so the shares do not sum to 100%.
Publication-type chart data
Publication types among 1,718 PubMed records
TypeRecordsShare
Reviews1066.2%
Meta-analyses00.0%
Randomized controlled trials140.8%

Method: PubMed query "Choline Deficiency"[MeSH Terms] with publication-type and date filters, retrieved 2026-10-31.

Reading the evidence in metabolism and endocrine disease

Studies of diabetes, obesity and hormone disorders often follow blood tests such as glucose, HbA1c or hormone levels, which are stand-ins for outcomes that matter more, such as complications. Lifestyle and diet research is largely observational, and weight and diabetes trials can differ in how long people were followed. Nothing on this page is advice about medicines, insulin or diet; talk to a qualified clinician about your own situation. Check whether the outcome was a lab value or a clinical event, and the type and duration of the condition studied.

Evidence from open-access studies

These open-access studies come from PubMed’s best-match results for this heading (papers whose main topic it is), ranked here by citation count, with one recent addition. Each abstract is reproduced in full under its recorded open licence so that you can read the authors’ own words. They illustrate the literature; they are not a systematic summary of it. Citation counts measure attention, not reliability or clinical benefit.

Study comparison — selected abstracts, not a systematic review
Study / authorsYearSource label / designEurope PMC citationsLicence / source
Growth differentiation factor 15 ameliorates nonalcoholic steatohepatitis and related metabolic disorders in mice
Kim KH, Kim SH, Han DH, Jo YS, Lee YH, Lee MS
2018Research article
Design not recorded in structured metadata
116cc by
PMID 29717162 · DOI · PMC5931608
Hepatocellular carcinoma in a mouse model fed a choline-deficient, L-amino acid-defined, high-fat diet
Ikawa-Yoshida A, Matsuo S, Kato A, Ohmori Y, Higashida A, Kaneko E, et al.
2017Research article
Design not recorded in structured metadata
87cc by
PMID 28895242 · DOI · PMC5639266
The necroptosis-inducing kinase RIPK3 dampens adipose tissue inflammation and glucose intolerance
Gautheron J, Vucur M, Schneider AT, Severi I, Roderburg C, Roy S, et al.
2016Research article
Design not recorded in structured metadata
86cc by
PMID 27323669 · DOI · PMC4919522
Choline and Choline-Related Metabolites in Pediatric Short Bowel Syndrome
Hilberath J, Shunova A, Heister L, Poets CF, Bernhard W
2026Research article
Design not recorded in structured metadata
0cc by
PMID 42197014 · DOI · PMC13209643

Growth differentiation factor 15 ameliorates nonalcoholic steatohepatitis and related metabolic disorders in mice [1]

Research article Kim KH, Kim SH, Han DH, Jo YS, Lee YH, Lee MS · · 2018 · cited 116 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Growth differentiation factor 15 (GDF15) is an endocrine hormone belonging to the TGFβ superfamily member.
Closing excerpt
Therefore, our results suggest that induction of endogenous GDF15 is a compensatory mechanism to protect against the progression of NASH and that GDF15 could be an attractive therapeutic candidate for treatment of NASH and NASH-related metabolic deterioration.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (199 words)

Growth differentiation factor 15 (GDF15) is an endocrine hormone belonging to the TGFβ superfamily member. GDF15 administration or GDF15 overexpression has been reported to have anti-obesity and anti-diabetic effects. Although non-alcoholic fatty liver disease (NAFLD)/non-alcoholic steatohepatitis (NASH) is frequently associated with obesity and insulin resistance, the functional role of endogenous GDF15 and therapeutic effect of GDF15 overexpression in NASH and related metabolic deterioration have not been evaluated. Here, we found that GDF15 expression was increased in the livers of NASH animal models and human subjects with NASH. Elevated expression of GDF15 was due to diet-induced hepatic endoplasmic reticulum (ER) stress. Gdf15-knockout mice exhibited aggravated NASH phenotypes such as increased steatosis, hepatic inflammation, fibrosis, liver injury, and metabolic deterioration. Furthermore, GDF15 directly suppressed expression of fibrosis-related genes and osteopontin (OPN), contributing factors for NASH-related fibrosis, in hepatic stellate cells in vitro and in the liver of mice in vivo. Finally, we found that GDF15-transgenic mice showed attenuation of NASH phenotypes and metabolic deterioration. Therefore, our results suggest that induction of endogenous GDF15 is a compensatory mechanism to protect against the progression of NASH and that GDF15 could be an attractive therapeutic candidate for treatment of NASH and NASH-related metabolic deterioration.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 29717162 · DOI · PMC5931608

Hepatocellular carcinoma in a mouse model fed a choline-deficient, L-amino acid-defined, high-fat diet [2]

Research article Ikawa-Yoshida A, Matsuo S, Kato A, Ohmori Y, Higashida A, Kaneko E, et al. · · 2017 · cited 87 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Hepatocellular carcinoma (HCC) is a common cancer worldwide and represents the outcome of the natural history of chronic liver disease.
Closing excerpt
The CDAHFD mouse model might be a useful tool for studying the development of HCC from NAFLD/NASH, and potentially useful for better understanding pathological changes during hepatocarcinogenesis.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (248 words)

Hepatocellular carcinoma (HCC) is a common cancer worldwide and represents the outcome of the natural history of chronic liver disease. The growing rates of HCC may be partially attributable to increased numbers of people with non-alcoholic fatty liver disease (NAFLD) and non-alcoholic steatohepatitis (NASH). However, details of the liver-specific molecular mechanisms responsible for the NAFLD-NASH-HCC progression remain unclear, and mouse models that can be used to explore the exact factors that influence the progression of NAFLD/NASH to the more chronic stages of liver disease and subsequent HCC are not yet fully established. We have previously reported a choline-deficient, L-amino acid-defined, high-fat diet (CDAHFD) as a dietary NASH model with rapidly progressive liver fibrosis in mice. The current study in C57BL/6J mice fed CDAHFD provided evidence for the chronic persistence of advanced hepatic fibrosis in NASH and disease progression towards HCC in a period of 36 weeks. When mice fed CDAHFD were switched back to a standard diet, hepatic steatosis was normalized and NAFLD activity score improved, but HCC incidence increased and the phenotype of fibrosis-associated HCC development was observed. Moreover, when mice continued to be fed CDAHFD for 60 weeks, HCC further developed without severe body weight loss or carcinogenesis in other organs. The autochthonous tumours showed a variety of histological features and architectural patterns including trabecular, pseudoglandular and solid growth. The CDAHFD mouse model might be a useful tool for studying the development of HCC from NAFLD/NASH, and potentially useful for better understanding pathological changes during hepatocarcinogenesis.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 28895242 · DOI · PMC5639266

The necroptosis-inducing kinase RIPK3 dampens adipose tissue inflammation and glucose intolerance [3]

Research article Gautheron J, Vucur M, Schneider AT, Severi I, Roderburg C, Roy S, et al. · · 2016 · cited 86 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Receptor-interacting protein kinase 3 (RIPK3) mediates necroptosis, a form of programmed cell death that promotes inflammation in various pathological conditions, suggesting that it might be a privileged pharmacological target.
Closing excerpt
Together, these findings provide evidence that RIPK3 in WAT maintains tissue homeostasis and suppresses inflammation and adipocyte apoptosis, suggesting that systemic targeting of necroptosis might be associated with the risk of promoting insulin resistance in obese patients.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (148 words)

Receptor-interacting protein kinase 3 (RIPK3) mediates necroptosis, a form of programmed cell death that promotes inflammation in various pathological conditions, suggesting that it might be a privileged pharmacological target. However, its function in glucose homeostasis and obesity has been unknown. Here we show that RIPK3 is over expressed in the white adipose tissue (WAT) of obese mice fed with a choline-deficient high-fat diet. Genetic inactivation of Ripk3 promotes increased Caspase-8-dependent adipocyte apoptosis and WAT inflammation, associated with impaired insulin signalling in WAT as the basis for glucose intolerance. Similarly to mice, in visceral WAT of obese humans, RIPK3 is overexpressed and correlates with the body mass index and metabolic serum markers. Together, these findings provide evidence that RIPK3 in WAT maintains tissue homeostasis and suppresses inflammation and adipocyte apoptosis, suggesting that systemic targeting of necroptosis might be associated with the risk of promoting insulin resistance in obese patients.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 27323669 · DOI · PMC4919522

Choline and Choline-Related Metabolites in Pediatric Short Bowel Syndrome [4]

Research article Hilberath J, Shunova A, Heister L, Poets CF, Bernhard W · · 2026

Abstract reading summary — source excerpts
Opening excerpt
Background: Choline is an essential nutrient crucial for liver function.
Closing excerpt
Controlled trials on choline supplementation in pediatric patients with SBS are warranted.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (276 words)

Background: Choline is an essential nutrient crucial for liver function. It is required for bile and lipoprotein secretion and the synthesis of both phosphatidylcholine (PC) to ensure tissue homeostasis and betaine as a methyl donor. Choline deficiency has been implicated in the pathogenesis of intestinal failure-associated liver disease (IFALD), with the strongest evidence for its contribution to hepatic steatosis in patients with short bowel syndrome (SBS). Contributing factors are (1) an impaired recycling of choline from bile PC, leading to fecal choline losses; (2) small bowel bacterial overgrowth resulting in choline degradation prior to absorption; and (3) parenteral nutrition (PN) insufficient to meet choline requirements. However, data on choline status and its metabolites in pediatric patients with SBS are scarce. Objective: To investigate plasma levels of choline and choline-related metabolites in children with SBS and evaluate differences according to PN dependency and the presence of hepatic steatosis. Methods: Retrospective analysis of data from SBS patients managed at our intestinal rehabilitation program between March 2021 and July 2025. Target parameters in plasma samples were measured using tandem mass spectrometry. Statistical analysis and group comparison of laboratory and clinical data were performed. Results: A total of 127 samples from 80 children with SBS (0.2-17.9 years) were analyzed. Plasma choline, betaine, and PC concentrations were low, with 25% of patients showing markedly reduced choline and betaine levels below 6.4 µmol/L and 16 µmol/L, respectively. TMAO concentrations, indicating bacterial choline degradation, showed extreme variability (0-30 µmol; normal Conclusions: Patients with SBS, with and without PN, are at risk of choline and betaine deficiency, which is associated with IFALD-steatosis. Controlled trials on choline supplementation in pediatric patients with SBS are warranted.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 42197014 · DOI · PMC13209643

Key reviews and meta-analyses

The most cited review-type papers among PubMed’s best-match results for this heading, listed with bibliographic details only. Follow the links for the full text and access terms.

  • Research article Choline: critical role during fetal development and dietary requirements in adults [5]
    Zeisel SH · Annu Rev Nutr · 2006 · cited 557 times (Europe PMC)
  • Research article An overview of evidence for a causal relationship between dietary availability of choline during development and cognitive function in offspring [6]
    McCann JC, Hudes M, Ames BN · Neurosci Biobehav Rev · 2006 · cited 110 times (Europe PMC)
  • Research article Updates on Dietary Models of Nonalcoholic Fatty Liver Disease: Current Studies and Insights [7]
    Stephenson K, Kennedy L, Hargrove L, Demieville J, Thomson J, Alpini G, et al. · Gene Expr · 2018 · cited 107 times (Europe PMC)
  • Research article Choline: needed for normal development of memory [8]
    Zeisel SH · J Am Coll Nutr · 2000 · cited 97 times (Europe PMC)
  • Research article Dietary choline deficiency causes DNA strand breaks and alters epigenetic marks on DNA and histones [9]
    Zeisel SH · Mutat Res · 2012 · cited 74 times (Europe PMC)
  • Research article Choline and choline-related nutrients in regular and preterm infant growth [10]
    Bernhard W, Poets CF, Franz AR · Eur J Nutr · 2019 · cited 71 times (Europe PMC)

References

  1. Kim KH, Kim SH, Han DH, Jo YS, Lee YH, Lee MS. Growth differentiation factor 15 ameliorates nonalcoholic steatohepatitis and related metabolic disorders in mice. . 2018. PMID 29717162 · DOI · PMC5931608
  2. Ikawa-Yoshida A, Matsuo S, Kato A, Ohmori Y, Higashida A, Kaneko E, et al.. Hepatocellular carcinoma in a mouse model fed a choline-deficient, L-amino acid-defined, high-fat diet. . 2017. PMID 28895242 · DOI · PMC5639266
  3. Gautheron J, Vucur M, Schneider AT, Severi I, Roderburg C, Roy S, et al.. The necroptosis-inducing kinase RIPK3 dampens adipose tissue inflammation and glucose intolerance. . 2016. PMID 27323669 · DOI · PMC4919522
  4. Hilberath J, Shunova A, Heister L, Poets CF, Bernhard W. Choline and Choline-Related Metabolites in Pediatric Short Bowel Syndrome. . 2026. PMID 42197014 · DOI · PMC13209643
  5. Zeisel SH. Choline: critical role during fetal development and dietary requirements in adults. Annu Rev Nutr. 2006. PMID 16848706 · DOI · PMC2441939
  6. McCann JC, Hudes M, Ames BN. An overview of evidence for a causal relationship between dietary availability of choline during development and cognitive function in offspring. Neurosci Biobehav Rev. 2006. PMID 16504295 · DOI
  7. Stephenson K, Kennedy L, Hargrove L, Demieville J, Thomson J, Alpini G, et al.. Updates on Dietary Models of Nonalcoholic Fatty Liver Disease: Current Studies and Insights. Gene Expr. 2018. PMID 29096730 · DOI · PMC5860971
  8. Zeisel SH. Choline: needed for normal development of memory. J Am Coll Nutr. 2000. PMID 11023003 · DOI
  9. Zeisel SH. Dietary choline deficiency causes DNA strand breaks and alters epigenetic marks on DNA and histones. Mutat Res. 2012. PMID 22041500 · DOI · PMC3319504
  10. Bernhard W, Poets CF, Franz AR. Choline and choline-related nutrients in regular and preterm infant growth. Eur J Nutr. 2019. PMID 30298207 · DOI

About this article

Sources
NLM Medical Subject Headings (definition, synonyms); NCBI PubMed (counts, identifiers); Europe PMC (open-access abstracts and citation counts).
Verification
Every reference was resolved against PubMed on 2026-11-04; title, year and DOI matched.
Review state
automated source verified; no human expert review has been recorded yet.
Version
1, last updated 2026-11-04.

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At a glance

1,718
PubMed records on this heading
10%
published since 2020
106
review articles
14
randomized trials
10
verified references below

Counts come from PubMed on 2026-10-31; they show how much has been written, not how strong the evidence is.

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  • Riboflavin DeficiencyMetabolism and Endocrine Disease
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  • Folic Acid DeficiencyMetabolism and Endocrine Disease
  • Thiamine DeficiencyMetabolism and Endocrine Disease

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