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Gastrointestinal Stromal Tumors

Cancer and Oncology · NLM MeSH · updated 2026-10-29 · version 1

Citations verified against PubMedNot yet clinician-reviewed10 referencesApproximately 4 min read

All tumors in the gastrointestinal tract arising from mesenchymal cells (mesoderm) except those of smooth muscle cells (leiomyoma) or Schwann cells (schwannoma).

Table of Contents

1. Definition2. Research landscape3. Reading the evidence4. Open-access studies5. Key reviews6. References7. About this article

Definition and research guide

This page combines a MeSH definition, publication statistics and selected research abstracts. It is a starting point for reading the literature, not a medical textbook or a systematic evidence review.

Content available: 4 complete abstracts (821 words), 10 references. Full article text is not stored or reproduced here; follow the PMID, DOI or PMC links to read the original sources and their access terms.

Definition

All tumors in the gastrointestinal tract arising from mesenchymal cells (mesoderm) except those of smooth muscle cells (leiomyoma) or Schwann cells (schwannoma).

Definition: NLM Medical Subject Headings (MeSH) scope note (Public domain (U.S. National Library of Medicine); attribution requested). View the MeSH record.

Also known as: Stromal Tumor, Gastrointestinal; Stromal Tumors, Gastrointestinal; Tumor, Gastrointestinal Stromal; Tumors, Gastrointestinal Stromal; Gastrointestinal Stromal Neoplasm; Gastrointestinal Stromal Neoplasms; Neoplasm, Gastrointestinal Stromal; Neoplasms, Gastrointestinal Stromal.

Where it fits in the MeSH classification

Broader topics
Neoplasms, Connective Tissue; Gastrointestinal Neoplasms

Related concepts

  • Gastrointestinal Tract
  • Mesoderm
  • Leiomyoma
  • Neurilemmoma

Research landscape

PubMed indexes 8,605 records tagged with the MeSH heading “Gastrointestinal Stromal Tumors” (counts retrieved 2026-10-29). 2,278 of them (26.5%) were published from 2020 onward, and the busiest period so far is 2010-2019 with 4,241 records.

Reviews account for 1,422 records (16.5%) and meta-analyses for 89. Randomized controlled trials number 119 (1.4%) as a share of all records on the topic. Randomized trials make up only a small share of this literature, so much of what is known comes from laboratory, observational or descriptive work.

PubMed records by publication periodthrough 1999: 0 records; 2000-2009: 2,191 records; 2010-2019: 4,241 records; 2020 onward: 2,278 records0through 19992,1912000-20094,2412010-20192,2782020 onward
Records in PubMed indexed with this heading, by publication period. Real counts from NCBI E-utilities; the final period covers only part of the current year. Volume reflects how much has been published, not how strong the evidence is.
Show the data
PeriodRecords
through 19990
2000-20092,191
2010-20194,241
2020 onward2,278
Share of records by publication typeReviews: 16.5 percent; Meta-analyses: 1.0 percent; Randomized controlled trials: 1.4 percentReviews16.5% (1,422)Meta-analyses1.0% (89)Randomized controlled trials1.4% (119)
Share of all PubMed records on this heading that carry each publication type. Types overlap with other records, so the shares do not sum to 100%.
Publication-type chart data
Publication types among 8,605 PubMed records
TypeRecordsShare
Reviews1,42216.5%
Meta-analyses891.0%
Randomized controlled trials1191.4%

Method: PubMed query "Gastrointestinal Stromal Tumors"[MeSH Terms] with publication-type and date filters, retrieved 2026-10-29.

Reading the evidence in cancer and oncology

Cancer research spans very different kinds of evidence. Laboratory studies in cell lines and animal models reveal mechanisms but often do not translate to patients. Early-phase trials mainly test safety and dosing, while phase 3 randomized trials and their meta-analyses are the usual basis for treatment conclusions. Outcomes also differ in meaning: tumour shrinkage, progression-free survival and overall survival are not interchangeable, and screening studies can be distorted by lead-time and overdiagnosis. When reading a result, check the cancer type and stage studied, the comparison treatment, and which outcome was measured.

Evidence from open-access studies

These open-access studies come from PubMed’s best-match results for this heading (papers whose main topic it is), ranked here by citation count, with one recent addition. Each abstract is reproduced in full under its recorded open licence so that you can read the authors’ own words. They illustrate the literature; they are not a systematic summary of it. Citation counts measure attention, not reliability or clinical benefit.

Study comparison — selected abstracts, not a systematic review
Study / authorsYearSource label / designEurope PMC citationsLicence / source
English version of Japanese Clinical Practice Guidelines 2022 for gastrointestinal stromal tumor (GIST) issued by the Japan Society of Clinical Oncology
Hirota S, Tateishi U, Nakamoto Y, Yamamoto H, Sakurai S, Kikuchi H, et al.
2024Research article
Design not recorded in structured metadata
67cc by
PMID 38609732 · DOI · PMC11130037
Ripretinib versus sunitinib in gastrointestinal stromal tumor: ctDNA biomarker analysis of the phase 3 INTRIGUE trial
Heinrich MC, Jones RL, George S, Gelderblom H, Schöffski P, von Mehren M, et al.
2024Randomized controlled trial
Design not recorded in structured metadata
54cc by
PMID 38182785 · DOI · PMC10878977
KIT mutations and expression: current knowledge and new insights for overcoming IM resistance in GIST
Zhou S, Abdihamid O, Tan F, Zhou H, Liu H, Li Z, et al.
2024Review article
Design not recorded in structured metadata
44cc by
PMID 38414063 · DOI · PMC10898159
Fibroblast growth factor receptor inhibition for succinate dehydrogenase-deficient gastrointestinal stromal tumors: a phase 2 trial
Merriam P, Morrow JJ, Mazzola E, Solimini NL, Gokhale PC, Chi P, et al.
2026Research article
Design not recorded in structured metadata
3cc by
PMID 42191879 · DOI · PMC13279270

English version of Japanese Clinical Practice Guidelines 2022 for gastrointestinal stromal tumor (GIST) issued by the Japan Society of Clinical Oncology [1]

Research article Hirota S, Tateishi U, Nakamoto Y, Yamamoto H, Sakurai S, Kikuchi H, et al. · · 2024 · cited 67 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
The Japan Society of Clinical Oncology Clinical Practice Guidelines 2022 for gastrointestinal stromal tumor (GIST) have been published in accordance with the Minds Manual for Guideline Development 2014 and 2017.
Closing excerpt
Although guidelines for the treatment of GIST have also been published by the National Comprehensive Cancer Network (NCCN) and the European Society for Medical Oncology (ESMO), there are some differences between the treatments proposed in those guidelines and the treatments in the present guidelines because of the differences in health insurance systems among countries.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (153 words)

The Japan Society of Clinical Oncology Clinical Practice Guidelines 2022 for gastrointestinal stromal tumor (GIST) have been published in accordance with the Minds Manual for Guideline Development 2014 and 2017. A specialized team independent of the working group for the revision performed a systematic review. Since GIST is a rare type of tumor, clinical evidence is not sufficient to answer several clinical and background questions. Thus, in these guidelines, we considered that consensus among the experts who manage GIST, the balance between benefits and harms, patients' wishes, medical economic perspective, etc. are important considerations in addition to the evidence. Although guidelines for the treatment of GIST have also been published by the National Comprehensive Cancer Network (NCCN) and the European Society for Medical Oncology (ESMO), there are some differences between the treatments proposed in those guidelines and the treatments in the present guidelines because of the differences in health insurance systems among countries.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 38609732 · DOI · PMC11130037

Ripretinib versus sunitinib in gastrointestinal stromal tumor: ctDNA biomarker analysis of the phase 3 INTRIGUE trial [2]

Randomized controlled trial Heinrich MC, Jones RL, George S, Gelderblom H, Schöffski P, von Mehren M, et al. · · 2024 · cited 54 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
INTRIGUE was an open-label, phase 3 study in adult patients with advanced gastrointestinal stromal tumor who had disease progression on or intolerance to imatinib and who were randomized to once-daily ripretinib 150 mg or sunitinib 50 mg.
Closing excerpt
gov identifier: NCT03673501.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (243 words)

INTRIGUE was an open-label, phase 3 study in adult patients with advanced gastrointestinal stromal tumor who had disease progression on or intolerance to imatinib and who were randomized to once-daily ripretinib 150 mg or sunitinib 50 mg. In the primary analysis, progression-free survival (PFS) with ripretinib was not superior to sunitinib. In clinical and nonclinical studies, ripretinib and sunitinib have demonstrated differential activity based on the exon location of KIT mutations. Therefore, we hypothesized that mutational analysis using circulating tumor DNA (ctDNA) might provide further insight. In this exploratory analysis (N = 362), baseline peripheral whole blood was analyzed by a 74-gene ctDNA next-generation sequencing-based assay. ctDNA was detected in 280/362 (77%) samples with KIT mutations in 213/362 patients (59%). Imatinib-resistant mutations were found in the KIT ATP-binding pocket (exons 13/14) and activation loop (exons 17/18). Mutational subgroup assessment showed 2 mutually exclusive populations with differential treatment effects. Patients with only KIT exon 11 + 13/14 mutations (ripretinib, n = 21; sunitinib, n = 20) had better PFS with sunitinib versus ripretinib (median, 15.0 versus 4.0 months). Patients with only KIT exon 11 + 17/18 mutations (ripretinib, n = 27; sunitinib, n = 25) had better PFS with ripretinib versus sunitinib (median, 14.2 versus 1.5 months). The results of this exploratory analysis suggest ctDNA sequencing may improve the prediction of the efficacy of single-drug therapies and support further evaluation of ripretinib in patients with KIT exon 11 + 17/18 mutations. ClinicalTrials.gov identifier: NCT03673501.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 38182785 · DOI · PMC10878977

KIT mutations and expression: current knowledge and new insights for overcoming IM resistance in GIST [3]

Review article Zhou S, Abdihamid O, Tan F, Zhou H, Liu H, Li Z, et al. · · 2024 · cited 44 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Gastrointestinal stromal tumor (GIST) is the most common sarcoma located in gastrointestinal tract and derived from the interstitial cell of Cajal (ICC) lineage.
Closing excerpt
Video Abstract.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (190 words)

Gastrointestinal stromal tumor (GIST) is the most common sarcoma located in gastrointestinal tract and derived from the interstitial cell of Cajal (ICC) lineage. Both ICC and GIST cells highly rely on KIT signal pathway. Clinically, about 80-90% of treatment-naive GIST patients harbor primary KIT mutations, and special KIT-targeted TKI, imatinib (IM) showing dramatic efficacy but resistance invariably occur, 90% of them was due to the second resistance mutations emerging within the KIT gene. Although there are multiple variants of KIT mutant which did not show complete uniform biologic characteristics, most of them have high KIT expression level. Notably, the high expression level of KIT gene is not correlated to its gene amplification. Recently, accumulating evidences strongly indicated that the gene coding, epigenetic regulation, and pre- or post- protein translation of KIT mutants in GIST were quite different from that of wild type (WT) KIT. In this review, we elucidate the biologic mechanism of KIT variants and update the underlying mechanism of the expression of KIT gene, which are exclusively regulated in GIST, providing a promising yet evidence-based therapeutic landscape and possible target for the conquer of IM resistance. Video Abstract.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 38414063 · DOI · PMC10898159

Fibroblast growth factor receptor inhibition for succinate dehydrogenase-deficient gastrointestinal stromal tumors: a phase 2 trial [4]

Research article Merriam P, Morrow JJ, Mazzola E, Solimini NL, Gokhale PC, Chi P, et al. · · 2026 · cited 3 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
While most gastrointestinal stromal tumors are driven by oncogenic mutations in KIT or PDGFRA, 10-15% exhibit functional loss of the succinate dehydrogenase (SDH) complex and genome-wide DNA hypermethylation.
Closing excerpt
gov identifier: NCT04595747 .
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (235 words)

While most gastrointestinal stromal tumors are driven by oncogenic mutations in KIT or PDGFRA, 10-15% exhibit functional loss of the succinate dehydrogenase (SDH) complex and genome-wide DNA hypermethylation. Excess methylation in SDH-deficient gastrointestinal stromal tumors disrupts genomic insulators, inducing aberrant expression of oncogenic ligands FGF3, FGF4, and activating an autocrine signaling loop mediated through FGFR1. We conducted a phase 2 trial of pan-fibroblast growth factor receptor inhibitor rogaratinib in patients with sarcoma and report here on the cohort of patients with advanced SDH-deficient GIST. The primary objective was to estimate objective response rate. Secondary objectives were to estimate progression-free survival (PFS) and assess safety and tolerability. Exploratory objectives were to evaluate serial measurements of FGF3 and FGF4 and fibroblast growth factor receptors in serial biopsies, to perform whole-exome sequencing in serial biopsies and to explore rogaratinib exposure with pharmacodynamic effects. Twenty-four patients received rogaratinib and ten experienced partial responses for an objective response rate of 41.7%. Median PFS was 31.0 months (95% confidence interval 20.2-not reached), and 1-year PFS was 77.4% (95% confidence interval 61.7-97.1). Toxicities were manageable and included hyperphosphatemia, fatigue and diarrhea. Elevations in phosphorous were seen across the cohort, consistent with target engagement of FGFR1. Whole-exome and next-generation sequencing revealed alterations in the SDH subunit coding genes (SDHx) as expected. This trial illustrates a successful demonstration of targeted cancer therapy predicated on an epigenetic mechanism of oncogene activation. Clinicaltrials.gov identifier: NCT04595747 .

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 42191879 · DOI · PMC13279270

Key reviews and meta-analyses

The most cited review-type papers among PubMed’s best-match results for this heading, listed with bibliographic details only. Follow the links for the full text and access terms.

  • Research article Risk of recurrence of gastrointestinal stromal tumour after surgery: an analysis of pooled population-based cohorts [5]
    Joensuu H, Vehtari A, Riihimäki J, Nishida T, Steigen SE, Brabec P, et al. · Lancet Oncol · 2012 · cited 691 times (Europe PMC)
  • Research article Gastrointestinal stromal tumours: ESMO-EURACAN-GENTURIS Clinical Practice Guidelines for diagnosis, treatment and follow-up [6]
    Casali PG, Blay JY, Abecassis N, Bajpai J, Bauer S, Biagini R, et al. · Ann Oncol · 2022 · cited 437 times (Europe PMC)
  • Research article Gastrointestinal stromal tumours [7]
    Blay JY, Kang YK, Nishida T, von Mehren M · Nat Rev Dis Primers · 2021 · cited 360 times (Europe PMC)
  • Research article Endoscopic management of subepithelial lesions including neuroendocrine neoplasms: European Society of Gastrointestinal Endoscopy (ESGE) Guideline [8]
    Deprez PH, Moons LMG, OʼToole D, Gincul R, Seicean A, Pimentel-Nunes P, et al. · Endoscopy · 2022 · cited 277 times (Europe PMC)
  • Research article Current clinical management of gastrointestinal stromal tumor [9]
    Akahoshi K, Oya M, Koga T, Shiratsuchi Y · World J Gastroenterol · 2018 · cited 271 times (Europe PMC)
  • Research article Gastrointestinal Stromal Tumors [10]
    von Mehren M, Joensuu H · J Clin Oncol · 2018 · cited 229 times (Europe PMC)

References

  1. Hirota S, Tateishi U, Nakamoto Y, Yamamoto H, Sakurai S, Kikuchi H, et al.. English version of Japanese Clinical Practice Guidelines 2022 for gastrointestinal stromal tumor (GIST) issued by the Japan Society of Clinical Oncology. . 2024. PMID 38609732 · DOI · PMC11130037
  2. Heinrich MC, Jones RL, George S, Gelderblom H, Schöffski P, von Mehren M, et al.. Ripretinib versus sunitinib in gastrointestinal stromal tumor: ctDNA biomarker analysis of the phase 3 INTRIGUE trial. . 2024. PMID 38182785 · DOI · PMC10878977
  3. Zhou S, Abdihamid O, Tan F, Zhou H, Liu H, Li Z, et al.. KIT mutations and expression: current knowledge and new insights for overcoming IM resistance in GIST. . 2024. PMID 38414063 · DOI · PMC10898159
  4. Merriam P, Morrow JJ, Mazzola E, Solimini NL, Gokhale PC, Chi P, et al.. Fibroblast growth factor receptor inhibition for succinate dehydrogenase-deficient gastrointestinal stromal tumors: a phase 2 trial. . 2026. PMID 42191879 · DOI · PMC13279270
  5. Joensuu H, Vehtari A, Riihimäki J, Nishida T, Steigen SE, Brabec P, et al.. Risk of recurrence of gastrointestinal stromal tumour after surgery: an analysis of pooled population-based cohorts. Lancet Oncol. 2012. PMID 22153892 · DOI
  6. Casali PG, Blay JY, Abecassis N, Bajpai J, Bauer S, Biagini R, et al.. Gastrointestinal stromal tumours: ESMO-EURACAN-GENTURIS Clinical Practice Guidelines for diagnosis, treatment and follow-up. Ann Oncol. 2022. PMID 34560242 · DOI
  7. Blay JY, Kang YK, Nishida T, von Mehren M. Gastrointestinal stromal tumours. Nat Rev Dis Primers. 2021. PMID 33737510 · DOI
  8. Deprez PH, Moons LMG, OʼToole D, Gincul R, Seicean A, Pimentel-Nunes P, et al.. Endoscopic management of subepithelial lesions including neuroendocrine neoplasms: European Society of Gastrointestinal Endoscopy (ESGE) Guideline. Endoscopy. 2022. PMID 35180797 · DOI
  9. Akahoshi K, Oya M, Koga T, Shiratsuchi Y. Current clinical management of gastrointestinal stromal tumor. World J Gastroenterol. 2018. PMID 30018476 · DOI · PMC6048423
  10. von Mehren M, Joensuu H. Gastrointestinal Stromal Tumors. J Clin Oncol. 2018. PMID 29220298 · DOI · PMC6553810

About this article

Sources
NLM Medical Subject Headings (definition, synonyms); NCBI PubMed (counts, identifiers); Europe PMC (open-access abstracts and citation counts).
Verification
Every reference was resolved against PubMed on 2026-10-31; title, year and DOI matched.
Review state
automated source verified; no human expert review has been recorded yet.
Version
1, last updated 2026-10-29.

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At a glance

8,605
PubMed records on this heading
26%
published since 2020
1,422
review articles
119
randomized trials
10
verified references below

Counts come from PubMed on 2026-10-29; they show how much has been written, not how strong the evidence is.

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